polyadenylate-binding protein 1; poly(A)-binding protein 1; PABP 1 (PABPC1, PAB1, PABP1, PABPC2)
Jump to navigation
Jump to search
Function
- binds the poly(A) tail of mRNA
- may be involved in cytoplasmic regulatory processes of mRNA metabolism such as pre-mRNA splicing
- its function in translational initiation regulation can either be enhanced by PAIP1 or repressed by PAIP2
- can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo
- may be involved in translationally coupled mRNA turnover
- implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational & decay interplay of FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain
- methylated by CARM1
- component of an autoregulatory ribonucleoprotein complex
- interacts with IGF2BP1
- part of a complex associated with the FOS mCRD domain, consisting of HNRPD, SYNCRIP, PAIP1 & CSDE1/UNR
- interacts with the PABPC1-interacting motif-1 (PAM1) & -2 (PAM2) of PAIP1 & PAIP2
- interacts with PAIP1 with a 1:1 stoichiometry & with PAIP2 with a 1:2 stoichiometry
- interaction with CSDE1 is direct & RNA-independent
- found in a mRNP complex with YBX2
- interacts with PAPD4/GLD2
- identified in the spliceosome C complex
- interacts with PIWIL1 (putative)
- interacts with NFX1
Structure
- Arg-493 is dimethylated, probably to asymmetric dimethylarginine
- the RNA-binding domains RRM1 & RRM2 & the C-terminus (last 138 amino acids) regions interact with the PABPC1-interacting motif-1 (PAM1) & -2 (PAM2) of PAIP1, respectively
- the RNA-binding domains RRM2 & RRM3 & the C-terminus (last 138 amino acids) regions interact with the PABPC1- interacting motif-1 (PAM1) & -2 (PAM2) of PAIP2, respectively
- belongs to the polyadenylate-binding protein type-1 family
- contains 1 PABC domain
- contains 4 RRM domain (RNA recognition motif)s
Compartment
- cytoplasm. nucleus
- shuttles between the cytoplasm & the nucleus
- relocalizes to the nucleus upon rotavirus A infection
Alternative splicing
named isoforms=2