nuclear RNA export factor 1; Tip-associated protein; Tip-associating protein; mRNA export factor TAP (NXF1, TAP)
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Function
- nuclear export of mRNA with retroviral constitutive transport elements
- export of mRNA from the nucleus to the cytoplasm
- heterodimer with NXT1
- interacts with NXT2, E1B-AP5, RAE1, THOC4, nucleoporins
- component of exon junction complex
- interacts with FYTTD1/UIF, EIF4A3, NUPL2 & THOC5
- interacts with: Saimiriine herpesvirus 2 TIP protein, NUPL2
Structure
- minimal CTE binding domain consists of an RNP-type RNA binding domain (RBD) & leucine-rich repeats
- the nucleoporin binding domain consists of a NTF2 domain & a TAP-C domain (UBA-like domain)
- 2 nucleoporin-FG-repeats binding sites (one in the NTF2 & the other in the TAP-C domain) which contribute to nucleoporin association & act synergistically to export cellular mRNAs
- the NTF2 domain is functional only in the presence of NXT1 & is essential for the export of mRNA from the nucleus
- the TAP-C domain mediates direct interactions with nucleoporin-FG-repeats & is necessary & sufficient for localization of NXF1 to the nuclear rim
- the conserved loop 594-NWD-596 of the TAP-C domain has a critical role in the interaction with nucleoporins
- the leucine-rich repeats are essential for the export of mRNA from the nucleus
- the RNA-binding domain is a non-canonical RNP-type domain
- belongs to the NXF family
- contains 4 LRR repeats (leucine-rich repeats)
- contains 1 NTF2 domain
- contains 1 RRM domain (RNA recognition motif)
- contains 1 TAP-C domain
Compartment
- nuclear, nucleoplasm & nuclear speckle
- localized predominantly in the nucleoplasm & at both the nucleoplasmic & cytoplasmic faces of the nuclear pore complex
- cytoplasm
- travels to the cytoplasm as part of the exon junction complex bound to mRNA
- shuttles between nucleus & cytoplasm
Alternative splicing
named isoforms=2
Expression
expressed ubiquitously