collagen 4 alpha-5 (COL4A5)
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Function
- type 4 collagen is the major structural component of glomerular basement membranes (GBM), forming a 'chicken-wire' meshwork together with laminins, proteoglycans and entactin/nidogen
- Pro at the third position of the tripeptide repeating unit (G-X-Y) are hydroxylated in some or all of the chains
- type 4 collagen contains numerous Cys which are involved in intermolecular & intramolecular disulfide bonding
- 12 of these, located in the NC1 domain, are conserved in all type 4 collagen
- the trimeric structure of the NC1 domains is stabilized by covalent bonds between Lys & Met residues (putative)
- there are six type 4 collagen isoforms, each of which can form a triple helix structure with 2 other chains to generate type 4 collagen network
Structure
- alpha chains of type 4 collagen have
- a non-collagenous domain (NC1) at their C-terminus
- frequent interruptions of the G-X-Y repeats in the long central triple-helical domain (which may cause flexibility in the triple helix)
- short N-terminal triple-helical 7S domain
- belongs to the type 4 collagen family
- contains 1 collagen 4 NC1 (C-terminal non-collagenous) domain
Compartment
Alternative splicing
named isoforms=2
Expression
isoform 2 is found in kidney
Pathology
- defects in COL4A5 are associated with hereditary nephritis, X-linked[6]
- defects in COL4A5 are the cause of Alport syndrome X-linked
- deletions covering the N-terminal regions of COL4A5 & COL4A6, which are localized in a head-to-head manner, are found in the chromosome Xq22.3 centromeric deletion syndrome
More general terms
Component of
References
- ↑ UniProt http://www.uniprot.org/uniprot/P29400.html
- ↑ GeneReviews http://www.ncbi.nlm.nih.gov/sites/genetests/lab/gene/COL4A5
- ↑ Alport syndrome & COL4A5 http://www.arup.utah.edu/database/ALPORT/ALPORT_welcome.php
- ↑ OMIM https://mirror.omim.org/entry/303630
- ↑ Entrez Gene http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=Graphics&list_uids=1287
- ↑ 6.0 6.1 Medical Knowledge Self Assessment Program (MKSAP) 17, American College of Physicians, Philadelphia 2015